Publications
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2024
JAROŠ Jiří, JAROŠ Marta and BUCHTA Martin. Estimation of Distributed Ultrasound Simulation Execution Time Using Machine Learning. In: 2024 IEEE Congress on Evolutionary Computation (CEC). Yokohama: Institute of Electrical and Electronics Engineers, 2024, pp. 1-8. ISBN 979-8-3503-0836-5.
DetailJAROŠ Marta and JAROŠ Jiří. k-Dispatch: Enabling Cost-Optimized Biomedical Workflow Offloading. In: HPDC '24: Proceedings of the 33rd International Symposium on High-Performance Parallel and Distributed Computing. New York: Association for Computing Machinery, 2024, pp. 358-360. ISBN 979-8-4007-0413-0.
DetailJAROŠ Marta and JAROŠ Jiří. k-Dispatch: Enabling Cost-Optimized Biomedical Workflow Offloading. Solan, 2024.
DetailJAROŠ Marta, TREEBY Bradley E. and JAROŠ Jiří. k-Plan: From the Hospital to the Cluster and Back. Sydney, 2024.
DetailJAROŠ Marta, OLŠÁK Ondřej and JAROŠ Jiří. System for managing HPC-services and workflow executions. Ostrava, 2024.
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2023
JAROŠ Marta and JAROŠ Jiří. Optimization of Execution Parameters of Moldable Ultrasound Workflows Under Incomplete Performance Data. In: Job Scheduling Strategies for Parallel Processing. Lecture Notes in Computer Science, LNCS 13592, vol. 13592. Virtual Event: Springer Nature Switzerland AG, 2023, pp. 152-171. ISBN 978-3-031-22697-7.
DetailOLŠÁK Ondřej, JAROŠ Marta and JAROŠ Jiří. System for managing HPC-services and workflow executions. Ostrava, 2023.
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2022
JAROŠ Marta and JAROŠ Jiří. k-Dispatch's Performance Modules for Advanced Workflow Submission. Soláň, 2022.
DetailJAROŠ Marta, TREEBY Bradley E. and JAROŠ Jiří. k-Plan: from the Hospital to the Cluster and back. Ostrava, 2022.
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2021
JAROŠ Marta, TREEBY Bradley E. and JAROŠ Jiří. Adaptive Execution Planning in Biomedical Workflow Management Systems. The Platform for Advanced Scientific Computing (PASC) Conference 2021. Geneva, 2021.
DetailJAROŠ Marta, SASÁK Tomáš, TREEBY Bradley E. and JAROŠ Jiří. Estimation of Execution Parameters for k-Wave Simulations. In: High Performance Computing in Science and Engineering. HPCSE 2019. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Cham: Springer Nature Switzerland AG, 2021, pp. 116-134. ISBN 978-3-030-67076-4.
DetailJAROŠ Marta and JAROŠ Jiří. k-Dispatch's Performance Modules for Advanced Workflow Submission. 5th Users' Conference of IT4Innovations. Ostrava, 2021.
DetailJAROŠ Marta and JAROŠ Jiří. Performance-Cost Optimization of Moldable Scientific Workflows. In: Job Scheduling Strategies for Parallel Processing. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Portland, Oregon USA: Springer International Publishing, 2021, pp. 149-167. ISBN 978-3-030-88223-5. ISSN 0302-9743.
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2020
KUKLIŠ Filip, JAROŠ Marta and JAROŠ Jiří. Accelerated Design of HIFU Treatment Plans Using Island-Based Evolutionary Strategy. In: Applications of Evolutionary Computation. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 12104. Cham: Springer International Publishing, 2020, pp. 463-478. ISBN 978-3-030-43721-3.
DetailJAROŠ Marta, TREEBY Bradley E., GEORGIOU Panayiotis and JAROŠ Jiří. k-Dispatch: A Workflow Management System for the Automated Execution of Biomedical Ultrasound Simulations on Remote Computing Resources. In: Proceedings of the Platform for Advanced Scientific Computing Conference, PASC 2020. New York: Association for Computing Machinery, 2020, pp. 1-10. ISBN 978-1-4503-7993-9.
DetailJAROŠ Marta, KLUSÁČEK Dalibor and JAROŠ Jiří. Optimizing Biomedical Ultrasound Workflow Scheduling Using Cluster Simulations. In: Job Scheduling Strategies for Parallel Processing. JSSPP 2020. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 12326. New Orleans: Springer Nature Switzerland AG, 2020, pp. 68-84. ISBN 978-3-030-63170-3.
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2019
JAROŠ Marta, TREEBY Bradley E. and JAROŠ Jiří. Adaptive Execution Planning in Biomedical Workflow Management Systems. Ostrava, 2019.
DetailJAROŠ Marta. Adaptive Execution Planning in Workflow Management Systems. In: Počítačové architektury a diagnostika 2019. Doksy: Academic and Medical Conference Agency, 2019, pp. 23-26. ISBN 978-80-88214-20-5.
DetailJAROŠ Marta, JAROŠ Jiří and TREEBY Bradley E. Adaptive Execution Planning in Workflow Management Systems. Denver, 2019.
DetailJAROŠ Marta, TREEBY Bradley E. and JAROŠ Jiří. Scientific workflow management framework. Soláň, 2019.
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2018
ČUDOVÁ Marta, TREEBY Bradley E. and JAROŠ Jiří. Design of HIFU Treatment Plans using Evolutionary Strategy. In: GECCO 2018 Companion - Proceedings of the 2018 Genetic and Evolutionary Computation Conference Companion. Kyoto: Association for Computing Machinery, 2018, pp. 1568-1575. ISBN 978-1-4503-5764-7.
DetailJAROŠ Marta, TREEBY Bradley E. and JAROŠ Jiří. Design of HIFU Treatment Plans using an Evolutionary Strategy. Ostrava, 2018.
DetailJAROŠ Marta. Scientific Workflows Management. In: Počítačové architektúry & diagnostika PAD 2018. Plzeň: University of West Bohemia in Pilsen, 2018, pp. 25-28. ISBN 978-80-261-0814-6.
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2017
ČUDOVÁ Marta and JAROŠ Jiří. Framework for Planning, Executing and Monitoring Cooperating Computations. Ostrava, 2017.
DetailČUDOVÁ Marta. Framework for Planning, Running and Monitoring Cooperating Computations. In: Počítačové architektúry & diagnostika PAD 2017. Bratislava: Slovak University of Technology in Bratislava, 2017, pp. 20-23. ISBN 978-80-972784-0-3.
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